Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PMS1P54277 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.7■□□□□ 0.26
PMS1P54277 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
PMS1P54277 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 AC027601.5-201ENST00000624065 2482 ntBASIC16.7■□□□□ 0.26
PMS1P54277 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
PMS1P54277 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.7■□□□□ 0.26
PMS1P54277 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PMS1P54277 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 AL645937.2-201ENST00000396808 931 ntBASIC16.69■□□□□ 0.26
PMS1P54277 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.69■□□□□ 0.26
PMS1P54277 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 INGX-202ENST00000489074 768 ntBASIC16.69■□□□□ 0.26
PMS1P54277 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.69■□□□□ 0.26
PMS1P54277 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.69■□□□□ 0.26
PMS1P54277 AC055876.2-201ENST00000531834 546 ntBASIC16.69■□□□□ 0.26
PMS1P54277 AC027796.2-201ENST00000575326 344 ntBASIC16.69■□□□□ 0.26
PMS1P54277 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.69■□□□□ 0.26
PMS1P54277 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.69■□□□□ 0.26
PMS1P54277 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
PMS1P54277 AC093813.1-201ENST00000605066 256 ntBASIC16.69■□□□□ 0.26
PMS1P54277 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PMS1P54277 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PMS1P54277 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PMS1P54277 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PMS1P54277 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.69■□□□□ 0.26
PMS1P54277 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.69■□□□□ 0.26
PMS1P54277 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PMS1P54277 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.68■□□□□ 0.26
PMS1P54277 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PMS1P54277 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.68■□□□□ 0.26
PMS1P54277 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.68■□□□□ 0.26
PMS1P54277 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 AC018665.1-201ENST00000622927 1362 ntBASIC16.68■□□□□ 0.26
PMS1P54277 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.68■□□□□ 0.26
PMS1P54277 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.68■□□□□ 0.26
PMS1P54277 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PMS1P54277 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 RNU1-114P-201ENST00000365297 166 ntBASIC16.68■□□□□ 0.26
PMS1P54277 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 MEP1AP4-201ENST00000423244 1087 ntBASIC16.68■□□□□ 0.26
PMS1P54277 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.68■□□□□ 0.26
PMS1P54277 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.68■□□□□ 0.26
PMS1P54277 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.68■□□□□ 0.26
PMS1P54277 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.68■□□□□ 0.26
PMS1P54277 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.68■□□□□ 0.26
PMS1P54277 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
PMS1P54277 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.68■□□□□ 0.26
PMS1P54277 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.68■□□□□ 0.26
PMS1P54277 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms