Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 KRT18P57-201ENST00000443599 1254 ntBASIC14.96□□□□□ -0.01
GTF2A1P52655 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC14.96□□□□□ -0.01
GTF2A1P52655 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 AC091607.1-201ENST00000490318 1060 ntBASIC14.96□□□□□ -0.01
GTF2A1P52655 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.96□□□□□ -0.01
GTF2A1P52655 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.96□□□□□ -0.01
GTF2A1P52655 AC023794.5-201ENST00000564380 2157 ntBASIC14.96□□□□□ -0.01
GTF2A1P52655 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.96□□□□□ -0.01
GTF2A1P52655 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.96□□□□□ -0.01
GTF2A1P52655 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.96□□□□□ -0.01
GTF2A1P52655 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.96□□□□□ -0.01
GTF2A1P52655 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.96□□□□□ -0.01
GTF2A1P52655 AC133561.5-201ENST00000635547 218 ntBASIC14.96□□□□□ -0.01
GTF2A1P52655 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.96□□□□□ -0.01
GTF2A1P52655 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.96□□□□□ -0.01
GTF2A1P52655 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
GTF2A1P52655 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.96□□□□□ -0.01
GTF2A1P52655 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GTF2A1P52655 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.96□□□□□ -0.02
GTF2A1P52655 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.96□□□□□ -0.02
GTF2A1P52655 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
GTF2A1P52655 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
GTF2A1P52655 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.96□□□□□ -0.02
GTF2A1P52655 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
GTF2A1P52655 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
GTF2A1P52655 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
GTF2A1P52655 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
GTF2A1P52655 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
GTF2A1P52655 PER1-211ENST00000581082 4521 ntTSL 5 BASIC14.95□□□□□ -0.02
GTF2A1P52655 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.95□□□□□ -0.02
GTF2A1P52655 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GTF2A1P52655 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
GTF2A1P52655 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
GTF2A1P52655 AC092647.4-201ENST00000457211 535 ntBASIC14.95□□□□□ -0.02
GTF2A1P52655 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC14.95□□□□□ -0.02
GTF2A1P52655 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC14.95□□□□□ -0.02
GTF2A1P52655 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.95□□□□□ -0.02
GTF2A1P52655 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
GTF2A1P52655 AC148477.5-201ENST00000625164 1645 ntBASIC14.95□□□□□ -0.02
GTF2A1P52655 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
GTF2A1P52655 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GTF2A1P52655 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GTF2A1P52655 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC14.95□□□□□ -0.02
GTF2A1P52655 PER1-202ENST00000354903 3115 ntTSL 2 BASIC14.95□□□□□ -0.02
GTF2A1P52655 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
GTF2A1P52655 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.94□□□□□ -0.02
GTF2A1P52655 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.94□□□□□ -0.02
GTF2A1P52655 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC14.94□□□□□ -0.02
GTF2A1P52655 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.94□□□□□ -0.02
GTF2A1P52655 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
GTF2A1P52655 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.94□□□□□ -0.02
GTF2A1P52655 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
GTF2A1P52655 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
GTF2A1P52655 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.94□□□□□ -0.02
GTF2A1P52655 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
GTF2A1P52655 UBTFL8-201ENST00000426903 2112 ntBASIC14.94□□□□□ -0.02
GTF2A1P52655 NUS1P1-201ENST00000446295 882 ntBASIC14.94□□□□□ -0.02
GTF2A1P52655 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.94□□□□□ -0.02
GTF2A1P52655 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.94□□□□□ -0.02
GTF2A1P52655 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.94□□□□□ -0.02
GTF2A1P52655 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.94□□□□□ -0.02
GTF2A1P52655 AC009533.2-201ENST00000543664 586 ntBASIC14.94□□□□□ -0.02
GTF2A1P52655 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms