Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMARCA4P51532 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMARCA4P51532 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC26.25■■□□□ 1.79
SMARCA4P51532 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC26.25■■□□□ 1.79
SMARCA4P51532 CSNK1G2P1-201ENST00000442675 955 ntBASIC26.25■■□□□ 1.79
SMARCA4P51532 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC26.25■■□□□ 1.79
SMARCA4P51532 OR5BD1P-201ENST00000532527 817 ntBASIC26.25■■□□□ 1.79
SMARCA4P51532 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC26.25■■□□□ 1.79
SMARCA4P51532 AL118522.1-201ENST00000611368 560 ntBASIC26.25■■□□□ 1.79
SMARCA4P51532 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC26.25■■□□□ 1.79
SMARCA4P51532 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC26.25■■□□□ 1.79
SMARCA4P51532 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC26.25■■□□□ 1.79
SMARCA4P51532 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC26.24■■□□□ 1.79
SMARCA4P51532 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SMARCA4P51532 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCA4P51532 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC26.24■■□□□ 1.79
SMARCA4P51532 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCA4P51532 BANP-204ENST00000393208 2283 ntTSL 2 BASIC26.24■■□□□ 1.79
SMARCA4P51532 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCA4P51532 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC26.24■■□□□ 1.79
SMARCA4P51532 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC26.24■■□□□ 1.79
SMARCA4P51532 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCA4P51532 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC26.24■■□□□ 1.79
SMARCA4P51532 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCA4P51532 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCA4P51532 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCA4P51532 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCA4P51532 BRD7P5-201ENST00000299197 1822 ntBASIC26.23■■□□□ 1.79
SMARCA4P51532 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 AC020658.6-201ENST00000623564 1870 ntBASIC26.23■■□□□ 1.79
SMARCA4P51532 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC26.23■■□□□ 1.79
SMARCA4P51532 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 C18orf15-201ENST00000623680 2534 ntBASIC26.23■■□□□ 1.79
SMARCA4P51532 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC26.23■■□□□ 1.79
SMARCA4P51532 API5-203ENST00000455725 2257 ntTSL 2 BASIC26.23■■□□□ 1.79
SMARCA4P51532 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SMARCA4P51532 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
SMARCA4P51532 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC26.23■■□□□ 1.79
SMARCA4P51532 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC26.23■■□□□ 1.79
SMARCA4P51532 USB1-205ENST00000561743 1135 ntTSL 3 BASIC26.23■■□□□ 1.79
SMARCA4P51532 AC055811.3-201ENST00000584952 686 ntBASIC26.23■■□□□ 1.79
SMARCA4P51532 AC010976.2-201ENST00000609697 852 ntBASIC26.23■■□□□ 1.79
SMARCA4P51532 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC26.23■■□□□ 1.79
SMARCA4P51532 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
SMARCA4P51532 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCA4P51532 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SMARCA4P51532 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
SMARCA4P51532 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC26.22■■□□□ 1.79
SMARCA4P51532 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCA4P51532 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCA4P51532 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC26.22■■□□□ 1.79
SMARCA4P51532 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCA4P51532 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC26.22■■□□□ 1.79
SMARCA4P51532 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCA4P51532 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC26.22■■□□□ 1.79
SMARCA4P51532 RPL35P9-201ENST00000446059 350 ntBASIC26.22■■□□□ 1.79
SMARCA4P51532 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC26.22■■□□□ 1.79
SMARCA4P51532 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCA4P51532 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC26.22■■□□□ 1.79
SMARCA4P51532 AC095040.1-201ENST00000513286 675 ntBASIC26.22■■□□□ 1.79
SMARCA4P51532 AC090386.2-201ENST00000623010 1039 ntBASIC26.22■■□□□ 1.79
SMARCA4P51532 AL136172.1-201ENST00000598590 1394 ntBASIC26.22■■□□□ 1.79
SMARCA4P51532 FTX-216ENST00000638985 1367 ntTSL 5 BASIC26.22■■□□□ 1.79
SMARCA4P51532 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
SMARCA4P51532 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCA4P51532 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCA4P51532 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC26.22■■□□□ 1.79
SMARCA4P51532 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC26.22■■□□□ 1.79
SMARCA4P51532 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCA4P51532 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCA4P51532 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCA4P51532 PPP1R2P4-201ENST00000424051 595 ntBASIC26.21■■□□□ 1.79
SMARCA4P51532 KRT18P46-201ENST00000435568 1279 ntBASIC26.21■■□□□ 1.79
SMARCA4P51532 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC26.21■■□□□ 1.79
SMARCA4P51532 OR2A1-AS1-210ENST00000496968 531 ntBASIC26.21■■□□□ 1.79
SMARCA4P51532 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC26.21■■□□□ 1.79
SMARCA4P51532 RPS5-204ENST00000598098 536 ntTSL 2 BASIC26.21■■□□□ 1.79
SMARCA4P51532 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCA4P51532 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCA4P51532 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCA4P51532 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCA4P51532 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC26.21■■□□□ 1.79
SMARCA4P51532 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC26.21■■□□□ 1.79
SMARCA4P51532 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
SMARCA4P51532 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCA4P51532 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCA4P51532 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCA4P51532 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms