Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 NEU4-217ENST00000618597 3013 ntTSL 218.9■□□□□ 0.621e-7■□□□□ 8.9
RPS3P23396 NEU4-206ENST00000415936 860 ntTSL 317.41■□□□□ 0.381e-7■□□□□ 8.9
RPS3P23396 NEU4-208ENST00000423583 753 ntTSL 517.19■□□□□ 0.341e-7■□□□□ 8.9
RPS3P23396 PPP4R2-203ENST00000470976 1033 ntTSL 226.57■■□□□ 1.849e-7■□□□□ 8.9
RPS3P23396 PPP4R2-206ENST00000488810 877 ntTSL 525.92■■□□□ 1.749e-7■□□□□ 8.9
RPS3P23396 PPP4R2-205ENST00000482242 771 ntTSL 325.82■■□□□ 1.729e-7■□□□□ 8.9
RPS3P23396 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.189e-7■□□□□ 8.9
RPS3P23396 FASTK-213ENST00000482806 1826 ntTSL 522.37■■□□□ 1.179e-7■□□□□ 8.9
RPS3P23396 FASTK-215ENST00000489884 1751 ntTSL 1 (best)21.71■■□□□ 1.079e-7■□□□□ 8.9
RPS3P23396 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.36■■□□□ 1.019e-7■□□□□ 8.9
RPS3P23396 FASTK-216ENST00000496663 818 ntTSL 221.36■■□□□ 1.019e-7■□□□□ 8.9
RPS3P23396 FASTK-205ENST00000461979 720 ntTSL 520.66■□□□□ 0.99e-7■□□□□ 8.9
RPS3P23396 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.36■□□□□ 0.859e-7■□□□□ 8.9
RPS3P23396 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.839e-7■□□□□ 8.9
RPS3P23396 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.759e-7■□□□□ 8.9
RPS3P23396 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.659e-7■□□□□ 8.9
RPS3P23396 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.59e-7■□□□□ 8.9
RPS3P23396 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.88■□□□□ 0.459e-7■□□□□ 8.9
RPS3P23396 PDLIM7-207ENST00000486828 1904 ntTSL 1 (best)17.76■□□□□ 0.439e-7■□□□□ 8.9
RPS3P23396 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.419e-7■□□□□ 8.9
RPS3P23396 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.49e-7■□□□□ 8.9
RPS3P23396 PDLIM7-208ENST00000493815 1686 ntTSL 1 (best)17.54■□□□□ 0.49e-7■□□□□ 8.9
RPS3P23396 FKBP8-204ENST00000596015 612 ntTSL 316.55■□□□□ 0.242e-7■□□□□ 8.9
RPS3P23396 FASTK-204ENST00000460980 1521 ntTSL 515.51■□□□□ 0.079e-7■□□□□ 8.9
RPS3P23396 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.01□□□□□ -0.019e-7■□□□□ 8.9
RPS3P23396 SF1-211ENST00000448404 2778 ntTSL 1 (best)14.45□□□□□ -0.19e-7■□□□□ 8.9
RPS3P23396 FKBP8-212ENST00000606531 460 ntTSL 214.17□□□□□ -0.149e-7■□□□□ 8.9
RPS3P23396 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.249e-7■□□□□ 8.9
RPS3P23396 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.48□□□□□ -0.259e-7■□□□□ 8.9
RPS3P23396 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.42□□□□□ -0.269e-7■□□□□ 8.9
RPS3P23396 SF1-210ENST00000443908 767 ntTSL 313.32□□□□□ -0.289e-7■□□□□ 8.9
RPS3P23396 SF1-216ENST00000486867 875 ntTSL 312.9□□□□□ -0.349e-7■□□□□ 8.9
RPS3P23396 IST1-223ENST00000545518 710 ntTSL 211.83□□□□□ -0.529e-7■□□□□ 8.9
RPS3P23396 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.529e-7■□□□□ 8.9
RPS3P23396 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.049e-7■□□□□ 8.9
RPS3P23396 CD53-203ENST00000471220 657 ntTSL 28.09□□□□□ -1.119e-7■□□□□ 8.9
RPS3P23396 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.05□□□□□ -1.129e-7■□□□□ 8.9
RPS3P23396 GXYLT2-202ENST00000491839 494 ntTSL 35.54□□□□□ -1.529e-7■□□□□ 8.9
RPS3P23396 KPNB1-208ENST00000580019 427 ntTSL 22.02□□□□□ -2.099e-7■□□□□ 8.9
RPS3P23396 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.56■■□□□ 1.29e-9■□□□□ 8.9
RPS3P23396 PRMT5-222ENST00000556426 563 ntTSL 319.26■□□□□ 0.679e-9■□□□□ 8.9
RPS3P23396 PRMT5-224ENST00000557015 628 ntTSL 219.18■□□□□ 0.669e-9■□□□□ 8.9
RPS3P23396 GMDS-203ENST00000467288 900 ntTSL 518.84■□□□□ 0.619e-9■□□□□ 8.9
RPS3P23396 GMDS-204ENST00000476972 591 ntTSL 218.47■□□□□ 0.559e-9■□□□□ 8.9
RPS3P23396 GMDS-205ENST00000486793 567 ntTSL 317.86■□□□□ 0.459e-9■□□□□ 8.9
RPS3P23396 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.39e-9■□□□□ 8.9
RPS3P23396 SORL1-206ENST00000527934 3032 ntTSL 2 BASIC10.75□□□□□ -0.692e-6■□□□□ 8.9
RPS3P23396 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC9□□□□□ -0.972e-6■□□□□ 8.9
RPS3P23396 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.54□□□□□ -1.042e-6■□□□□ 8.9
RPS3P23396 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.03□□□□□ -1.122e-6■□□□□ 8.9
RPS3P23396 CLSTN1-204ENST00000464286 563 ntTSL 26.96□□□□□ -1.39e-9■□□□□ 8.9
RPS3P23396 PRMT5-220ENST00000556032 643 ntTSL 56.56□□□□□ -1.369e-9■□□□□ 8.9
RPS3P23396 TMBIM6-205ENST00000546885 578 ntTSL 418.06■□□□□ 0.483e-20■□□□□ 8.8
RPS3P23396 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.382e-12■□□□□ 8.8
RPS3P23396 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.162e-12■□□□□ 8.8
RPS3P23396 CCNI-202ENST00000504697 610 ntTSL 410.56□□□□□ -0.729e-7■□□□□ 8.8
RPS3P23396 CCNI-207ENST00000513774 517 ntTSL 47.79□□□□□ -1.169e-7■□□□□ 8.8
RPS3P23396 CCNI-203ENST00000505609 541 ntTSL 46.26□□□□□ -1.419e-7■□□□□ 8.8
RPS3P23396 CCNI-206ENST00000511943 576 ntTSL 30.42□□□□□ -2.349e-7■□□□□ 8.8
RPS3P23396 EEF1A1-205ENST00000455918 701 ntTSL 218.72■□□□□ 0.592e-61■□□□□ 8.8
RPS3P23396 EEF1A1-204ENST00000356303 635 ntTSL 28.48□□□□□ -1.052e-61■□□□□ 8.8
RPS3P23396 SARAF-212ENST00000523127 735 ntTSL 54.8□□□□□ -1.641e-8■□□□□ 8.8
RPS3P23396 SARAF-204ENST00000518296 878 ntTSL 23.96□□□□□ -1.781e-8■□□□□ 8.8
RPS3P23396 ATP5I-203ENST00000506525 496 ntTSL 1 (best)14.32□□□□□ -0.123e-9■□□□□ 8.8
RPS3P23396 ATP5I-205ENST00000515202 393 ntTSL 26.61□□□□□ -1.353e-9■□□□□ 8.8
RPS3P23396 ATP5I-204ENST00000515116 247 ntTSL 24.21□□□□□ -1.743e-9■□□□□ 8.8
RPS3P23396 ITGB1-217ENST00000494395 562 ntTSL 38.55□□□□□ -1.046e-10■□□□□ 8.8
RPS3P23396 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.67■□□□□ 0.261e-6■□□□□ 8.8
RPS3P23396 DUSP6-203ENST00000547140 604 ntTSL 315.47■□□□□ 0.071e-6■□□□□ 8.8
RPS3P23396 GNAS-236ENST00000479025 466 ntTSL 213.3□□□□□ -0.285e-12■□□□□ 8.8
RPS3P23396 SEC23A-211ENST00000555682 398 ntTSL 20.55□□□□□ -2.325e-12■□□□□ 8.8
RPS3P23396 OAZ1-206ENST00000589739 657 ntTSL 217.53■□□□□ 0.43e-47■□□□□ 8.8
RPS3P23396 TMEM259-210ENST00000592618 1877 ntTSL 524.49■■□□□ 1.512e-9■□□□□ 8.8
RPS3P23396 TMEM259-208ENST00000592052 1637 nt24.4■■□□□ 1.52e-9■□□□□ 8.8
RPS3P23396 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.062e-9■□□□□ 8.8
RPS3P23396 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.872e-9■□□□□ 8.8
RPS3P23396 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.91■□□□□ 0.622e-9■□□□□ 8.8
RPS3P23396 TMEM259-211ENST00000593068 1965 ntTSL 517.69■□□□□ 0.422e-9■□□□□ 8.8
RPS3P23396 TMEM259-205ENST00000586704 2538 ntTSL 517.62■□□□□ 0.412e-9■□□□□ 8.8
RPS3P23396 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.53■□□□□ 0.082e-6■□□□□ 8.8
RPS3P23396 AGRN-207ENST00000478677 276 ntTSL 211.37□□□□□ -0.591e-14■□□□□ 8.8
RPS3P23396 PCSK6-207ENST00000558951 543 ntTSL 38.95□□□□□ -0.982e-6■□□□□ 8.8
RPS3P23396 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.42■■□□□ 1.022e-15■□□□□ 8.8
RPS3P23396 ACP1-208ENST00000442386 546 ntTSL 418.44■□□□□ 0.542e-15■□□□□ 8.8
RPS3P23396 ACP1-202ENST00000272067 1552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.512e-15■□□□□ 8.8
RPS3P23396 ACP1-206ENST00000413140 689 ntTSL 211.1□□□□□ -0.632e-15■□□□□ 8.8
RPS3P23396 ACP1-210ENST00000463831 1015 ntTSL 211.1□□□□□ -0.632e-15■□□□□ 8.8
RPS3P23396 ACP1-209ENST00000453390 577 ntTSL 1 (best)10.88□□□□□ -0.672e-15■□□□□ 8.8
RPS3P23396 ACP1-213ENST00000484464 573 ntTSL 48.1□□□□□ -1.112e-15■□□□□ 8.8
RPS3P23396 AUP1-205ENST00000464887 845 ntTSL 213.49□□□□□ -0.252e-13■□□□□ 8.8
RPS3P23396 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.84■□□□□ 0.453e-6■□□□□ 8.8
RPS3P23396 DCTN5-202ENST00000563188 547 ntTSL 516.62■□□□□ 0.253e-6■□□□□ 8.8
RPS3P23396 DCTN5-206ENST00000566298 744 ntTSL 46.92□□□□□ -1.33e-6■□□□□ 8.8
RPS3P23396 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.36□□□□□ -0.273e-15■□□□□ 8.8
RPS3P23396 PFDN5-208ENST00000549995 598 ntTSL 311.71□□□□□ -0.533e-15■□□□□ 8.8
RPS3P23396 PFDN5-210ENST00000550513 939 ntTSL 310.36□□□□□ -0.753e-15■□□□□ 8.8
RPS3P23396 PFDN5-215ENST00000551223 478 ntTSL 49.28□□□□□ -0.923e-15■□□□□ 8.8
RPS3P23396 PFDN5-205ENST00000547228 726 ntTSL 55.24□□□□□ -1.573e-15■□□□□ 8.8
RPS3P23396 PFDN5-209ENST00000550069 599 ntTSL 25.24□□□□□ -1.573e-15■□□□□ 8.8
RPS3P23396 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.17■□□□□ 0.821e-8■□□□□ 8.8
Retrieved 100 of 24,271 protein–RNA pairs in 450.2 ms