RNA–Protein interactions for RNA: ENST00000555682.1

SEC23A-211, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-211ENST00000555682 AEBP2Q6ZN18 517 aaPredicted RBP31.34■■■□□ 2.61
SEC23A-211ENST00000555682 CHIC1Q5VXU3 224 aa30.23■■■□□ 2.43
SEC23A-211ENST00000555682 SENP3Q9H4L4 574 aaPredicted RBP26.75■■□□□ 1.87
SEC23A-211ENST00000555682 PHF23Q9BUL5 403 aaPredicted RBP26.49■■□□□ 1.83
SEC23A-211ENST00000555682 FOXD1Q16676 465 aa24.83■■□□□ 1.57
SEC23A-211ENST00000555682 PLPPR3Q6T4P5 718 aa24.38■■□□□ 1.49
SEC23A-211ENST00000555682 PPP6R1Q9UPN7 881 aa23.51■■□□□ 1.35
SEC23A-211ENST00000555682 ADRA2BP18089 450 aa23.48■■□□□ 1.35
SEC23A-211ENST00000555682 PIAS4Q8N2W9 510 aaPredicted RBP23.34■■□□□ 1.33
SEC23A-211ENST00000555682 MSH5O43196 834 aa23.13■■□□□ 1.29
SEC23A-211ENST00000555682 POTEDQ86YR6 584 aa21.8■■□□□ 1.08
SEC23A-211ENST00000555682 SCAF1Q9H7N4 1312 aaKnown RBP21.56■■□□□ 1.04
SEC23A-211ENST00000555682 MAPK8IP2Q13387 824 aaPredicted RBP21.42■■□□□ 1.02
SEC23A-211ENST00000555682 PPP4R3CPQ6ZMV5 832 aa21.4■■□□□ 1.02
SEC23A-211ENST00000555682 DMRT2Q9Y5R5 561 aa21.26■□□□□ 0.99
SEC23A-211ENST00000555682 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
SEC23A-211ENST00000555682 NCBP3Q53F19 620 aaKnown RBP20.75■□□□□ 0.91
SEC23A-211ENST00000555682 HOXD11P31277 338 aaPredicted RBP20.64■□□□□ 0.89
SEC23A-211ENST00000555682 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
SEC23A-211ENST00000555682 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
SEC23A-211ENST00000555682 DCAF8L1A6NGE4 600 aa20.38■□□□□ 0.85
SEC23A-211ENST00000555682 KCNA4P22459 653 aa20.37■□□□□ 0.85
SEC23A-211ENST00000555682 DNAJC5BQ9UF47 199 aa19.89■□□□□ 0.77
SEC23A-211ENST00000555682 RNF39Q9H2S5 420 aa19.74■□□□□ 0.75
SEC23A-211ENST00000555682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.74
SEC23A-211ENST00000555682 CACNB1Q02641 598 aaPredicted RBP19.58■□□□□ 0.72
SEC23A-211ENST00000555682 C1QBPQ07021 282 aaKnown RBP19.51■□□□□ 0.71
SEC23A-211ENST00000555682 SLC4A2P04920 1241 aa19.35■□□□□ 0.69
SEC23A-211ENST00000555682 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
SEC23A-211ENST00000555682 U3KPZ7 1027 aaPredicted RBP19.29■□□□□ 0.68
SEC23A-211ENST00000555682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.96■□□□□ 0.63
SEC23A-211ENST00000555682 HNRNPUL2Q1KMD3 747 aaKnown RBP18.96■□□□□ 0.63
SEC23A-211ENST00000555682 FOXD4L1Q9NU39 408 aa18.92■□□□□ 0.62
SEC23A-211ENST00000555682 MYCNP04198 464 aaPredicted RBP18.9■□□□□ 0.62
SEC23A-211ENST00000555682 APLP2Q06481 763 aa18.9■□□□□ 0.62
SEC23A-211ENST00000555682 SPINK5Q9NQ38 1064 aaPredicted RBP18.87■□□□□ 0.61
SEC23A-211ENST00000555682 CAPN15O75808 1086 aa18.86■□□□□ 0.61
SEC23A-211ENST00000555682 SAMD1Q6SPF0 538 aaPredicted RBP18.86■□□□□ 0.61
SEC23A-211ENST00000555682 ZBTB22O15209 634 aa18.72■□□□□ 0.59
SEC23A-211ENST00000555682 ZNF219Q9P2Y4 722 aaPredicted RBP18.67■□□□□ 0.58
SEC23A-211ENST00000555682 TRHP20396 242 aaPredicted RBP18.65■□□□□ 0.58
SEC23A-211ENST00000555682 DSG3P32926 999 aa18.62■□□□□ 0.57
SEC23A-211ENST00000555682 ABCB7O75027 752 aa18.44■□□□□ 0.54
SEC23A-211ENST00000555682 ATF5Q9Y2D1 282 aaPredicted RBP18.35■□□□□ 0.53
SEC23A-211ENST00000555682 ATXN8OSP0DMR3 200 aa18.31■□□□□ 0.52
SEC23A-211ENST00000555682 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
SEC23A-211ENST00000555682 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
SEC23A-211ENST00000555682 POLA2Q14181 598 aa18.24■□□□□ 0.51
SEC23A-211ENST00000555682 ZBTB12Q9Y330 459 aaPredicted RBP17.97■□□□□ 0.47
SEC23A-211ENST00000555682 RBM42Q9BTD8 480 aaKnown RBP17.82■□□□□ 0.44
SEC23A-211ENST00000555682 FBLN2P98095 1184 aa17.69■□□□□ 0.42
SEC23A-211ENST00000555682 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
SEC23A-211ENST00000555682 MKRN4PQ13434 485 aaPredicted RBP17.54■□□□□ 0.4
SEC23A-211ENST00000555682 AKT1S1Q96B36 256 aa17.48■□□□□ 0.39
SEC23A-211ENST00000555682 SPDYE2BA6NHP3 402 aa17.42■□□□□ 0.38
SEC23A-211ENST00000555682 SPDYE6P0CI01 402 aa17.42■□□□□ 0.38
SEC23A-211ENST00000555682 SPDYE2Q495Y8 402 aa17.42■□□□□ 0.38
SEC23A-211ENST00000555682 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
SEC23A-211ENST00000555682 ZNF692Q9BU19 519 aaPredicted RBP17.27■□□□□ 0.36
SEC23A-211ENST00000555682 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
SEC23A-211ENST00000555682 SSUH2Q9Y2M2 353 aa17.21■□□□□ 0.35
SEC23A-211ENST00000555682 POTEHQ6S545 545 aa17.19■□□□□ 0.34
SEC23A-211ENST00000555682 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
SEC23A-211ENST00000555682 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
SEC23A-211ENST00000555682 SPDYE1Q8NFV5 336 aaPredicted RBP17.01■□□□□ 0.31
SEC23A-211ENST00000555682 SPDYE4A6NLX3 237 aa16.97■□□□□ 0.31
SEC23A-211ENST00000555682 CLEC11AQ9Y240 323 aa16.95■□□□□ 0.3
SEC23A-211ENST00000555682 PIP4P2Q8N4L2 257 aa16.89■□□□□ 0.29
SEC23A-211ENST00000555682 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
SEC23A-211ENST00000555682 PRR29P0C7W0 189 aa16.74■□□□□ 0.27
SEC23A-211ENST00000555682 STAG3Q9UJ98 1225 aa16.69■□□□□ 0.26
SEC23A-211ENST00000555682 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
SEC23A-211ENST00000555682 PROM2Q8N271 834 aa16.61■□□□□ 0.25
SEC23A-211ENST00000555682 FKBP8Q14318 412 aa16.56■□□□□ 0.24
SEC23A-211ENST00000555682 CHADLQ6NUI6 762 aa16.56■□□□□ 0.24
SEC23A-211ENST00000555682 HAX1O00165 279 aa16.49■□□□□ 0.23
SEC23A-211ENST00000555682 CREBZFQ9NS37 354 aa16.39■□□□□ 0.21
SEC23A-211ENST00000555682 FARP1Q9Y4F1 1045 aaPredicted RBP16.37■□□□□ 0.21
SEC23A-211ENST00000555682 SP7Q8TDD2 431 aaPredicted RBP16.32■□□□□ 0.2
SEC23A-211ENST00000555682 C19orf67A6NJJ6 358 aa16.31■□□□□ 0.2
SEC23A-211ENST00000555682 EVX2Q03828 476 aa16.25■□□□□ 0.19
SEC23A-211ENST00000555682 CD44P16070 742 aaKnown RBP16.18■□□□□ 0.18
SEC23A-211ENST00000555682 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
SEC23A-211ENST00000555682 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
SEC23A-211ENST00000555682 MNX1P50219 401 aaPredicted RBP16.15■□□□□ 0.18
SEC23A-211ENST00000555682 MIER1Q8N108 512 aa16.15■□□□□ 0.18
SEC23A-211ENST00000555682 FBXO3Q9UK99 471 aa16.14■□□□□ 0.17
SEC23A-211ENST00000555682 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
SEC23A-211ENST00000555682 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.16
SEC23A-211ENST00000555682 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
SEC23A-211ENST00000555682 ZBTB47Q9UFB7 747 aaPredicted RBP15.98■□□□□ 0.15
SEC23A-211ENST00000555682 GABBR2O75899 941 aa15.96■□□□□ 0.15
SEC23A-211ENST00000555682 ZNF579Q8NAF0 562 aaKnown RBP15.95■□□□□ 0.14
SEC23A-211ENST00000555682 CLCN6P51797 869 aa15.91■□□□□ 0.14
SEC23A-211ENST00000555682 VASPP50552 380 aaPredicted RBP15.9■□□□□ 0.14
SEC23A-211ENST00000555682 TSPYL2Q9H2G4 693 aaPredicted RBP15.84■□□□□ 0.13
SEC23A-211ENST00000555682 RASEFQ8IZ41 740 aa15.8■□□□□ 0.12
SEC23A-211ENST00000555682 PHF12Q96QT6 1004 aa15.8■□□□□ 0.12
SEC23A-211ENST00000555682 NUBP1P53384 320 aa15.76■□□□□ 0.11
SEC23A-211ENST00000555682 KLHL34Q8N239 644 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms