Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 POU5F1P2-201ENST00000521750 823 ntBASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 AC005962.1-201ENST00000584100 773 ntBASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 RN7SKP230-201ENST00000365642 335 ntBASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSB-PGBD3P0DP91 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 AC006058.4-201ENST00000624016 1670 ntBASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 AL627231.1-201ENST00000394467 1125 ntBASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 NPM1P43-201ENST00000558669 786 ntBASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 AC007718.1-201ENST00000621078 280 ntBASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms