Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 AC027612.1-201ENST00000445234 2395 ntBASIC13.63□□□□□ -0.23
CDRT1O95170 PPT1-213ENST00000641319 2388 ntBASIC13.63□□□□□ -0.23
CDRT1O95170 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.63□□□□□ -0.23
CDRT1O95170 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.63□□□□□ -0.23
CDRT1O95170 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.63□□□□□ -0.23
CDRT1O95170 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.63□□□□□ -0.23
CDRT1O95170 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.63□□□□□ -0.23
CDRT1O95170 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.63□□□□□ -0.23
CDRT1O95170 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.63□□□□□ -0.23
CDRT1O95170 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.63□□□□□ -0.23
CDRT1O95170 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.63□□□□□ -0.23
CDRT1O95170 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.63□□□□□ -0.23
CDRT1O95170 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.63□□□□□ -0.23
CDRT1O95170 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.63□□□□□ -0.23
CDRT1O95170 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CDRT1O95170 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.63□□□□□ -0.23
CDRT1O95170 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.63□□□□□ -0.23
CDRT1O95170 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.63□□□□□ -0.23
CDRT1O95170 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CDRT1O95170 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CDRT1O95170 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.63□□□□□ -0.23
CDRT1O95170 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CDRT1O95170 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 AC105206.1-202ENST00000314927 2368 ntBASIC13.63□□□□□ -0.23
CDRT1O95170 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDRT1O95170 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDRT1O95170 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
CDRT1O95170 AL031595.1-201ENST00000623969 4709 ntBASIC13.62□□□□□ -0.23
CDRT1O95170 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CDRT1O95170 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CDRT1O95170 TPM4P1-201ENST00000436100 807 ntBASIC13.62□□□□□ -0.23
CDRT1O95170 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 RNA5SP410-201ENST00000516285 106 ntBASIC13.62□□□□□ -0.23
CDRT1O95170 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
CDRT1O95170 AC027307.2-201ENST00000591252 911 ntBASIC13.62□□□□□ -0.23
CDRT1O95170 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CDRT1O95170 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CDRT1O95170 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDRT1O95170 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.62□□□□□ -0.23
CDRT1O95170 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CDRT1O95170 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CDRT1O95170 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 IL9RP2-201ENST00000423948 1312 ntBASIC13.62□□□□□ -0.23
CDRT1O95170 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDRT1O95170 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CDRT1O95170 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.61□□□□□ -0.23
CDRT1O95170 AC023090.2-201ENST00000625182 2110 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms