Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC067863.1-201ENST00000494933 530 ntBASIC14.44□□□□□ -0.1
SCN2BO60939 MEIS3P1-201ENST00000495167 958 ntBASIC14.44□□□□□ -0.1
SCN2BO60939 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.44□□□□□ -0.1
SCN2BO60939 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SCN2BO60939 TIMM17BP1-201ENST00000545713 516 ntBASIC14.44□□□□□ -0.1
SCN2BO60939 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.44□□□□□ -0.1
SCN2BO60939 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.44□□□□□ -0.1
SCN2BO60939 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.44□□□□□ -0.1
SCN2BO60939 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SCN2BO60939 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SCN2BO60939 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
SCN2BO60939 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 GRK6P1-201ENST00000400595 1711 ntBASIC14.44□□□□□ -0.1
SCN2BO60939 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.43□□□□□ -0.1
SCN2BO60939 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 AC093525.8-201ENST00000624099 1342 ntBASIC14.43□□□□□ -0.1
SCN2BO60939 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SCN2BO60939 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.43□□□□□ -0.1
SCN2BO60939 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.43□□□□□ -0.1
SCN2BO60939 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SCN2BO60939 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SCN2BO60939 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.43□□□□□ -0.1
SCN2BO60939 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.43□□□□□ -0.1
SCN2BO60939 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.43□□□□□ -0.1
SCN2BO60939 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.43□□□□□ -0.1
SCN2BO60939 AC004066.1-201ENST00000502488 802 ntBASIC14.43□□□□□ -0.1
SCN2BO60939 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.43□□□□□ -0.1
SCN2BO60939 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.43□□□□□ -0.1
SCN2BO60939 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.43□□□□□ -0.1
SCN2BO60939 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SCN2BO60939 AP001160.2-201ENST00000596071 487 ntBASIC14.43□□□□□ -0.1
SCN2BO60939 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.43□□□□□ -0.1
SCN2BO60939 AC093028.1-201ENST00000622998 982 ntBASIC14.43□□□□□ -0.1
SCN2BO60939 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SCN2BO60939 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.43□□□□□ -0.1
SCN2BO60939 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.43□□□□□ -0.1
SCN2BO60939 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SCN2BO60939 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SCN2BO60939 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.43□□□□□ -0.1
SCN2BO60939 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.43□□□□□ -0.1
SCN2BO60939 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SCN2BO60939 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCN2BO60939 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SCN2BO60939 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SCN2BO60939 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
SCN2BO60939 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SCN2BO60939 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.42□□□□□ -0.1
SCN2BO60939 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.42□□□□□ -0.1
SCN2BO60939 DRD5P1-201ENST00000456605 1438 ntBASIC14.42□□□□□ -0.1
SCN2BO60939 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
SCN2BO60939 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
SCN2BO60939 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.42□□□□□ -0.1
SCN2BO60939 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.42□□□□□ -0.1
SCN2BO60939 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.42□□□□□ -0.1
SCN2BO60939 HLA-K-203ENST00000430151 1046 ntBASIC14.42□□□□□ -0.1
SCN2BO60939 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.42□□□□□ -0.1
SCN2BO60939 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms