Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IDH3BO43837 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.07□□□□□ -0.16
IDH3BO43837 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
IDH3BO43837 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
IDH3BO43837 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.07□□□□□ -0.16
IDH3BO43837 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.07□□□□□ -0.16
IDH3BO43837 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.07□□□□□ -0.16
IDH3BO43837 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.07□□□□□ -0.16
IDH3BO43837 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.07□□□□□ -0.16
IDH3BO43837 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.07□□□□□ -0.16
IDH3BO43837 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.07□□□□□ -0.16
IDH3BO43837 KRT18P32-201ENST00000424695 1287 ntBASIC14.07□□□□□ -0.16
IDH3BO43837 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
IDH3BO43837 DNAJB3-201ENST00000446806 729 ntBASIC14.07□□□□□ -0.16
IDH3BO43837 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.07□□□□□ -0.16
IDH3BO43837 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.07□□□□□ -0.16
IDH3BO43837 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.07□□□□□ -0.16
IDH3BO43837 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.07□□□□□ -0.16
IDH3BO43837 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
IDH3BO43837 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
IDH3BO43837 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
IDH3BO43837 AC007967.4-201ENST00000614700 386 ntBASIC14.07□□□□□ -0.16
IDH3BO43837 AL513210.1-201ENST00000629608 234 ntBASIC14.07□□□□□ -0.16
IDH3BO43837 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 AC084364.1-201ENST00000551967 1556 ntBASIC14.07□□□□□ -0.16
IDH3BO43837 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.07□□□□□ -0.16
IDH3BO43837 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.07□□□□□ -0.16
IDH3BO43837 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 KRT8P12-202ENST00000472924 1397 ntBASIC14.07□□□□□ -0.16
IDH3BO43837 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.07□□□□□ -0.16
IDH3BO43837 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.07□□□□□ -0.16
IDH3BO43837 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IDH3BO43837 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.06□□□□□ -0.16
IDH3BO43837 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
IDH3BO43837 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.06□□□□□ -0.16
IDH3BO43837 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
IDH3BO43837 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
IDH3BO43837 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.06□□□□□ -0.16
IDH3BO43837 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
IDH3BO43837 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.06□□□□□ -0.16
IDH3BO43837 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
IDH3BO43837 HIST3H2BA-201ENST00000436555 524 ntBASIC14.06□□□□□ -0.16
IDH3BO43837 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.06□□□□□ -0.16
IDH3BO43837 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.06□□□□□ -0.16
IDH3BO43837 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.06□□□□□ -0.16
IDH3BO43837 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.06□□□□□ -0.16
IDH3BO43837 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.06□□□□□ -0.16
IDH3BO43837 BANF1P1-201ENST00000553684 263 ntBASIC14.06□□□□□ -0.16
IDH3BO43837 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.06□□□□□ -0.16
IDH3BO43837 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.06□□□□□ -0.16
IDH3BO43837 AL121894.2-201ENST00000602977 491 ntBASIC14.06□□□□□ -0.16
IDH3BO43837 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.06□□□□□ -0.16
IDH3BO43837 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.06□□□□□ -0.16
IDH3BO43837 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.06□□□□□ -0.16
IDH3BO43837 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
IDH3BO43837 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
IDH3BO43837 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.06□□□□□ -0.16
IDH3BO43837 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.06□□□□□ -0.16
IDH3BO43837 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.06□□□□□ -0.16
IDH3BO43837 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.06□□□□□ -0.16
IDH3BO43837 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IDH3BO43837 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
IDH3BO43837 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.05□□□□□ -0.16
IDH3BO43837 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.05□□□□□ -0.16
IDH3BO43837 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.05□□□□□ -0.16
IDH3BO43837 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms