Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SDCBPO00560 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SDCBPO00560 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SDCBPO00560 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.01□□□□□ -0.33
SDCBPO00560 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SDCBPO00560 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SDCBPO00560 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.01□□□□□ -0.33
SDCBPO00560 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.01□□□□□ -0.33
SDCBPO00560 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SDCBPO00560 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.01□□□□□ -0.33
SDCBPO00560 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.01□□□□□ -0.33
SDCBPO00560 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.01□□□□□ -0.33
SDCBPO00560 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SDCBPO00560 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SDCBPO00560 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SDCBPO00560 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SDCBPO00560 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SDCBPO00560 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SDCBPO00560 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 AC010327.5-201ENST00000586923 3061 ntBASIC13□□□□□ -0.33
SDCBPO00560 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 FES-203ENST00000394302 2133 ntTSL 5 BASIC13□□□□□ -0.33
SDCBPO00560 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SDCBPO00560 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 TSEN15P1-201ENST00000423257 515 ntBASIC13□□□□□ -0.33
SDCBPO00560 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13□□□□□ -0.33
SDCBPO00560 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13□□□□□ -0.33
SDCBPO00560 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SDCBPO00560 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 SERBP1P3-201ENST00000459980 809 ntBASIC13□□□□□ -0.33
SDCBPO00560 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 AC069262.1-201ENST00000539058 672 ntBASIC13□□□□□ -0.33
SDCBPO00560 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SDCBPO00560 AL512356.2-201ENST00000546955 174 ntBASIC13□□□□□ -0.33
SDCBPO00560 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13□□□□□ -0.33
SDCBPO00560 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13□□□□□ -0.33
SDCBPO00560 AL691403.2-201ENST00000618460 490 ntBASIC13□□□□□ -0.33
SDCBPO00560 MIR6069-201ENST00000620069 79 ntBASIC13□□□□□ -0.33
SDCBPO00560 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SDCBPO00560 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 AL928921.2-201ENST00000641325 2442 ntBASIC13□□□□□ -0.33
SDCBPO00560 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDCBPO00560 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13□□□□□ -0.33
SDCBPO00560 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
SDCBPO00560 AC113367.3-201ENST00000508316 1912 ntBASIC13□□□□□ -0.33
SDCBPO00560 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SDCBPO00560 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.99□□□□□ -0.33
SDCBPO00560 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.99□□□□□ -0.33
SDCBPO00560 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDCBPO00560 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDCBPO00560 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SDCBPO00560 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SDCBPO00560 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.99□□□□□ -0.33
SDCBPO00560 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDCBPO00560 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SDCBPO00560 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.99□□□□□ -0.33
SDCBPO00560 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SDCBPO00560 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SDCBPO00560 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.99□□□□□ -0.33
SDCBPO00560 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.99□□□□□ -0.33
SDCBPO00560 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms