Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.41□□□□□ -0.1
UPK1AO00322 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 RN7SL399P-201ENST00000471648 279 ntBASIC14.41□□□□□ -0.1
UPK1AO00322 FAM86LP-201ENST00000478302 853 ntBASIC14.41□□□□□ -0.1
UPK1AO00322 GAPDHP40-201ENST00000505218 1006 ntBASIC14.41□□□□□ -0.1
UPK1AO00322 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.41□□□□□ -0.1
UPK1AO00322 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.41□□□□□ -0.1
UPK1AO00322 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
UPK1AO00322 AC036164.1-201ENST00000570544 333 ntBASIC14.41□□□□□ -0.1
UPK1AO00322 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
UPK1AO00322 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.41□□□□□ -0.1
UPK1AO00322 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.41□□□□□ -0.1
UPK1AO00322 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
UPK1AO00322 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.41□□□□□ -0.1
UPK1AO00322 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
UPK1AO00322 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UPK1AO00322 REXO1L4P-201ENST00000605109 1937 ntBASIC14.41□□□□□ -0.1
UPK1AO00322 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
UPK1AO00322 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
UPK1AO00322 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UPK1AO00322 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.4□□□□□ -0.1
UPK1AO00322 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UPK1AO00322 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.4□□□□□ -0.1
UPK1AO00322 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK1AO00322 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
UPK1AO00322 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK1AO00322 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UPK1AO00322 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.4□□□□□ -0.1
UPK1AO00322 MEP1AP4-201ENST00000423244 1087 ntBASIC14.4□□□□□ -0.1
UPK1AO00322 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
UPK1AO00322 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK1AO00322 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.4□□□□□ -0.1
UPK1AO00322 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.4□□□□□ -0.1
UPK1AO00322 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.4□□□□□ -0.1
UPK1AO00322 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.4□□□□□ -0.1
UPK1AO00322 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.4□□□□□ -0.1
UPK1AO00322 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.4□□□□□ -0.1
UPK1AO00322 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
UPK1AO00322 AC009118.2-201ENST00000613275 655 ntBASIC14.4□□□□□ -0.1
UPK1AO00322 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 AJ011932.1-201ENST00000621707 465 ntBASIC14.4□□□□□ -0.1
UPK1AO00322 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK1AO00322 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
UPK1AO00322 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1AO00322 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK1AO00322 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
UPK1AO00322 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms