Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 IGHV3-62-201ENST00000520057 340 ntBASIC13.25□□□□□ -0.29
SHISA3A0PJX4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 SLC25A6P4-201ENST00000586535 553 ntBASIC13.25□□□□□ -0.29
SHISA3A0PJX4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 AC020658.7-201ENST00000624274 2442 ntBASIC13.25□□□□□ -0.29
SHISA3A0PJX4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 AC083964.2-201ENST00000623988 2396 ntBASIC13.24□□□□□ -0.29
SHISA3A0PJX4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 UXT-AS1-201ENST00000590504 1525 ntBASIC13.24□□□□□ -0.29
SHISA3A0PJX4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.24□□□□□ -0.29
SHISA3A0PJX4 FAM58CP-201ENST00000435741 640 ntBASIC13.24□□□□□ -0.29
SHISA3A0PJX4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 AC120057.1-201ENST00000483947 663 ntBASIC13.24□□□□□ -0.29
SHISA3A0PJX4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 SAMD11P1-201ENST00000571429 661 ntBASIC13.24□□□□□ -0.29
SHISA3A0PJX4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 AF228730.6-201ENST00000641497 218 ntBASIC13.24□□□□□ -0.29
SHISA3A0PJX4 AC084121.3-201ENST00000641716 218 ntBASIC13.24□□□□□ -0.29
SHISA3A0PJX4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 Z97205.2-201ENST00000564697 1639 ntBASIC13.24□□□□□ -0.29
SHISA3A0PJX4 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms