Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 ZBED1P1-201ENST00000502364 1930 ntBASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 AC097065.1-201ENST00000425737 517 ntBASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 XBP1P1-201ENST00000436573 652 ntBASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 AC131206.1-201ENST00000538078 1211 ntBASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 MIR3188-201ENST00000583494 85 ntBASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 MIR6756-201ENST00000616240 63 ntBASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 AP005117.1-202ENST00000581724 1908 ntBASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LOC102724428A0A0B4J2F2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 RBM8B-201ENST00000555532 525 ntBASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LOC102724428A0A0B4J2F2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LOC102724428A0A0B4J2F2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.97■□□□□ 0.63
LOC102724428A0A0B4J2F2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LOC102724428A0A0B4J2F2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LOC102724428A0A0B4J2F2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.97■□□□□ 0.63
LOC102724428A0A0B4J2F2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms