Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 AC104794.3-201ENST00000566840 1248 ntBASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 AC092337.1-201ENST00000568699 1129 ntBASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 AC009407.1-201ENST00000568958 598 ntBASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 AC036164.1-201ENST00000570544 333 ntBASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 AC008738.7-201ENST00000609744 511 ntBASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 AC015656.1-201ENST00000624209 3578 ntBASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 MROH4P-201ENST00000431302 1578 ntBASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 AC004890.2-204ENST00000481968 304 ntBASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 INGX-202ENST00000489074 768 ntBASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 RNA5SP421-201ENST00000516864 134 ntBASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 TPRX2P-201ENST00000535362 881 ntBASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 SRD5A3P1-201ENST00000603021 949 ntBASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 AL158212.4-201ENST00000624062 1286 ntBASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms