Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 AC099063.4-201ENST00000641099 1602 ntBASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 AL645937.2-201ENST00000396808 931 ntBASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 AC104989.1-201ENST00000519711 778 ntBASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 AP005482.1-201ENST00000563722 1273 ntBASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 MIR4259-201ENST00000584466 101 ntBASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 NUS1P3-201ENST00000423502 862 ntBASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 KRT18P25-201ENST00000508931 1278 ntBASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 AC133552.6-201ENST00000613406 534 ntBASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 COX11-210ENST00000639671 696 ntBASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL4A3BPQ9Y5P4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 AC007274.1-201ENST00000439805 662 ntBASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 KRT223P-202ENST00000449164 1292 ntBASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 KLF2P4-201ENST00000451959 1225 ntBASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 CTBP2P5-201ENST00000454986 1264 ntBASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 FTH1P14-201ENST00000482930 551 ntBASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.99■□□□□ 0.31
COL4A3BPQ9Y5P4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms