Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 AC004461.2-201ENST00000629517 803 ntBASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 AC015656.1-201ENST00000624209 3578 ntBASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR1DQ9Y2S0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AL512638.1-201ENST00000457493 794 ntBASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AC025181.2-201ENST00000606994 802 ntBASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AC106028.4-201ENST00000614509 607 ntBASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AC138969.3-201ENST00000546612 1459 ntBASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AC138932.2-201ENST00000548268 1459 ntBASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AC126755.4-201ENST00000549796 1459 ntBASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 ZBED1P1-201ENST00000502364 1930 ntBASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 MROH4P-201ENST00000431302 1578 ntBASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR1DQ9Y2S0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms