Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 AL583805.1-201ENST00000391389 531 ntBASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 AC027237.1-201ENST00000560942 655 ntBASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 AC005618.3-201ENST00000624928 458 ntBASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 AL513523.2-202ENST00000427283 2040 ntBASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 AC024909.3-201ENST00000611513 2257 ntBASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 Z69890.1-201ENST00000382990 339 ntBASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 KLF2P1-201ENST00000447438 1042 ntBASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 DUTP3-201ENST00000450025 415 ntBASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 MIR5196-201ENST00000578146 115 ntBASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 AC073592.2-201ENST00000623062 780 ntBASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.17■□□□□ 0.5
ZC3H4Q9UPT8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 AL357563.1-201ENST00000404728 395 ntBASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 HLA-K-203ENST00000430151 1046 ntBASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 GCSHP3-201ENST00000431120 391 ntBASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 DDX39AP1-201ENST00000445147 1181 ntBASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 MIR4472-1-201ENST00000584349 80 ntBASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 MIR4522-201ENST00000584932 87 ntBASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
ZC3H4Q9UPT8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 AL662844.4-201ENST00000606367 2838 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms