Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 KLF2P2-201ENST00000416807 1039 ntBASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 MYO15B-237ENST00000642007 4893 ntBASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4E1Q9UPM8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 CICP14-201ENST00000629111 2732 ntBASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 AC126755.1-201ENST00000525846 6405 ntBASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 AC114812.1-204ENST00000449669 728 ntBASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 AP001063.1-201ENST00000568332 529 ntBASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 AP005019.2-201ENST00000615104 511 ntBASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.77■□□□□ 0.12
AP4E1Q9UPM8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
AP4E1Q9UPM8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms