Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
DNMT3BQ9UBC3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNMT3BQ9UBC3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.75■□□□□ 0.11
DNMT3BQ9UBC3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
DNMT3BQ9UBC3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNMT3BQ9UBC3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
DNMT3BQ9UBC3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNMT3BQ9UBC3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
DNMT3BQ9UBC3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
DNMT3BQ9UBC3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNMT3BQ9UBC3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNMT3BQ9UBC3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 CROCCP1-201ENST00000426910 5675 ntBASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 Z97180.1-201ENST00000445173 988 ntBASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AC104073.2-201ENST00000453737 312 ntBASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AC091544.8-201ENST00000619490 361 ntBASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AL162426.1-201ENST00000624141 743 ntBASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AC002472.3-201ENST00000640124 621 ntBASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AC004923.1-202ENST00000642106 209 ntBASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AC092384.3-202ENST00000564646 2873 ntBASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AC009093.2-202ENST00000620513 2079 ntBASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DNMT3BQ9UBC3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 REXO1L4P-201ENST00000605109 1937 ntBASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 AC091046.1-201ENST00000331871 207 ntBASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 TUBB8P8-201ENST00000458717 1058 ntBASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 RN7SL720P-201ENST00000488178 304 ntBASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 AC013355.1-201ENST00000562625 723 ntBASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 RN7SL163P-201ENST00000583100 276 ntBASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 AC026740.1-201ENST00000607068 791 ntBASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 AC004899.1-201ENST00000424687 1714 ntBASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms