Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 AL353732.1-201ENST00000569618 1459 ntBASIC18.19■□□□□ 0.5
RTN4Q9NQC3 AC004241.5-201ENST00000623870 2448 ntBASIC18.19■□□□□ 0.5
RTN4Q9NQC3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 AL354892.3-201ENST00000586101 1630 ntBASIC18.18■□□□□ 0.5
RTN4Q9NQC3 AP001972.5-201ENST00000624624 2338 ntBASIC18.18■□□□□ 0.5
RTN4Q9NQC3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.18■□□□□ 0.5
RTN4Q9NQC3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 AL035422.2-201ENST00000603059 565 ntBASIC18.17■□□□□ 0.5
RTN4Q9NQC3 AC020658.4-201ENST00000613987 684 ntBASIC18.17■□□□□ 0.5
RTN4Q9NQC3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 PCDHB17P-202ENST00000623466 3066 ntBASIC18.17■□□□□ 0.5
RTN4Q9NQC3 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 CES1P1-201ENST00000421606 1704 ntBASIC18.17■□□□□ 0.5
RTN4Q9NQC3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 Z95114.4-201ENST00000623420 3578 ntBASIC18.17■□□□□ 0.5
RTN4Q9NQC3 AC131902.2-201ENST00000566892 2172 ntBASIC18.17■□□□□ 0.5
RTN4Q9NQC3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 AC008677.1-201ENST00000519230 1561 ntBASIC18.17■□□□□ 0.5
RTN4Q9NQC3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN4Q9NQC3 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 ELK2BP-201ENST00000415014 1224 ntBASIC18.16■□□□□ 0.5
RTN4Q9NQC3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms