Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17■□□□□ 0.31
CBX8Q9HC52 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 MCCD1P2-201ENST00000423228 335 ntBASIC17■□□□□ 0.31
CBX8Q9HC52 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17■□□□□ 0.31
CBX8Q9HC52 AL079307.3-201ENST00000556114 283 ntBASIC17■□□□□ 0.31
CBX8Q9HC52 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CBX8Q9HC52 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17■□□□□ 0.31
CBX8Q9HC52 LINC01115-203ENST00000606068 577 ntBASIC17■□□□□ 0.31
CBX8Q9HC52 AC120114.3-201ENST00000611923 658 ntBASIC17■□□□□ 0.31
CBX8Q9HC52 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17■□□□□ 0.31
CBX8Q9HC52 AC007967.4-201ENST00000614700 386 ntBASIC17■□□□□ 0.31
CBX8Q9HC52 BX640515.1-201ENST00000617215 977 ntBASIC17■□□□□ 0.31
CBX8Q9HC52 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CBX8Q9HC52 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17■□□□□ 0.31
CBX8Q9HC52 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 AC105206.1-202ENST00000314927 2368 ntBASIC17■□□□□ 0.31
CBX8Q9HC52 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17■□□□□ 0.31
CBX8Q9HC52 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17■□□□□ 0.31
CBX8Q9HC52 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
CBX8Q9HC52 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 ST20-AS1-201ENST00000560255 4223 ntBASIC16.99■□□□□ 0.31
CBX8Q9HC52 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.99■□□□□ 0.31
CBX8Q9HC52 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CBX8Q9HC52 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CBX8Q9HC52 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CBX8Q9HC52 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CBX8Q9HC52 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CBX8Q9HC52 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms