Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 AC012044.1-201ENST00000603431 297 ntBASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 MBLAC2-202ENST00000514906 1936 ntBASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.72■□□□□ 0.75
RAPGEF4Q8WZA2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
RAPGEF4Q8WZA2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 AC020916.1-201ENST00000587762 1774 ntBASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 CEP164P1-201ENST00000455142 418 ntBASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 AC009884.2-201ENST00000603110 324 ntBASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 MIR7845-201ENST00000618396 99 ntBASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 AC006453.1-201ENST00000636037 1257 ntBASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 AL118508.1-201ENST00000613502 2345 ntBASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 FAM90A7P-201ENST00000382628 1395 ntBASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 FAM90A23P-201ENST00000400136 1395 ntBASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAPGEF4Q8WZA2 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.69■□□□□ 0.74
RAPGEF4Q8WZA2 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms