Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 AL138828.2-201ENST00000615812 383 ntBASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 AC023090.2-201ENST00000625182 2110 ntBASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 AC004461.2-201ENST00000629517 803 ntBASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SLC44A1Q8WWI5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 AC010327.5-201ENST00000586923 3061 ntBASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms