Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 AL009178.2-201ENST00000597278 2719 ntBASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 AL138799.1-201ENST00000448213 1675 ntBASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.79■□□□□ 0.44
SMARCC2Q8TAQ2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 ENPP7P5-201ENST00000541031 1031 ntBASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCC2Q8TAQ2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 AL158070.2-201ENST00000623713 1621 ntBASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms