Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 RNA5SP410-201ENST00000516285 106 ntBASIC13.23□□□□□ -0.29
BEST4Q8NFU0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 KRT19P2-202ENST00000557173 1012 ntBASIC13.23□□□□□ -0.29
BEST4Q8NFU0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 AC068137.2-201ENST00000605408 478 ntBASIC13.23□□□□□ -0.29
BEST4Q8NFU0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 AL031008.1-201ENST00000619963 541 ntBASIC13.22□□□□□ -0.29
BEST4Q8NFU0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 CYP4F24P-201ENST00000586049 1580 ntBASIC13.22□□□□□ -0.29
BEST4Q8NFU0 CICP11-201ENST00000434745 2827 ntBASIC13.22□□□□□ -0.29
BEST4Q8NFU0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 AC130686.1-201ENST00000622936 2466 ntBASIC13.22□□□□□ -0.29
BEST4Q8NFU0 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 FOXO1B-201ENST00000504678 1527 ntBASIC13.22□□□□□ -0.29
BEST4Q8NFU0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
BEST4Q8NFU0 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms