Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 AC120045.2-201ENST00000567334 178 ntBASIC14.26□□□□□ -0.13
NUP43Q8NFH3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.26□□□□□ -0.13
NUP43Q8NFH3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 AL391825.1-201ENST00000457671 1364 ntBASIC14.25□□□□□ -0.13
NUP43Q8NFH3 AC007292.2-201ENST00000593524 1812 ntBASIC14.25□□□□□ -0.13
NUP43Q8NFH3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 C1QBPP1-201ENST00000400117 770 ntBASIC14.25□□□□□ -0.13
NUP43Q8NFH3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 NUS1P3-201ENST00000423502 862 ntBASIC14.25□□□□□ -0.13
NUP43Q8NFH3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 AL442647.2-201ENST00000429864 857 ntBASIC14.25□□□□□ -0.13
NUP43Q8NFH3 HMGN1P19-201ENST00000436976 333 ntBASIC14.25□□□□□ -0.13
NUP43Q8NFH3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 FAM207CP-201ENST00000443486 507 ntBASIC14.25□□□□□ -0.13
NUP43Q8NFH3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms