Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 AC107890.1-201ENST00000422478 521 ntBASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 AC069120.2-201ENST00000524091 540 ntBASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 AC027369.6-201ENST00000525520 931 ntBASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 AC025678.2-201ENST00000562061 970 ntBASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 AC000095.1-201ENST00000603208 874 ntBASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 AC074044.1-201ENST00000609673 707 ntBASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 AC073592.8-201ENST00000624126 511 ntBASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 LILRP1-201ENST00000444199 1370 ntBASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN22Q8N7P3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLDN22Q8N7P3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
CLDN22Q8N7P3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.9□□□□□ -0.19
CLDN22Q8N7P3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLDN22Q8N7P3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.9□□□□□ -0.19
CLDN22Q8N7P3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 AC018529.2-202ENST00000611482 3087 ntBASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 TREML5P-201ENST00000421694 576 ntBASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 RN7SL618P-201ENST00000477850 296 ntBASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 SAMD11P1-201ENST00000571429 661 ntBASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 AC139530.3-201ENST00000620344 690 ntBASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN22Q8N7P3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms