Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 AL138725.1-201ENST00000407347 1314 ntBASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 MIR1202-201ENST00000408529 83 ntBASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 AC073413.1-201ENST00000603927 732 ntBASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 AL033527.4-201ENST00000641026 673 ntBASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARHGEF39Q8N4T4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
ARHGEF39Q8N4T4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 FTLP10-202ENST00000505798 471 ntBASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 INE2-201ENST00000630399 1874 ntBASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms