Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SIX5Q8N196 AC104581.4-201ENST00000623126 3052 ntBASIC15.6■□□□□ 0.09
SIX5Q8N196 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SIX5Q8N196 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.6■□□□□ 0.09
SIX5Q8N196 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SIX5Q8N196 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SIX5Q8N196 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SIX5Q8N196 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.6■□□□□ 0.09
SIX5Q8N196 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.6■□□□□ 0.09
SIX5Q8N196 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SIX5Q8N196 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
SIX5Q8N196 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SIX5Q8N196 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.6■□□□□ 0.09
SIX5Q8N196 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SIX5Q8N196 CHMP1AP1-201ENST00000445563 662 ntBASIC15.6■□□□□ 0.09
SIX5Q8N196 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
SIX5Q8N196 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.6■□□□□ 0.09
SIX5Q8N196 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.6■□□□□ 0.09
SIX5Q8N196 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.6■□□□□ 0.09
SIX5Q8N196 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.6■□□□□ 0.09
SIX5Q8N196 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 COX6A1P2-201ENST00000620597 330 ntBASIC15.6■□□□□ 0.09
SIX5Q8N196 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.6■□□□□ 0.09
SIX5Q8N196 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SIX5Q8N196 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SIX5Q8N196 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.6■□□□□ 0.09
SIX5Q8N196 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.6■□□□□ 0.09
SIX5Q8N196 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.59■□□□□ 0.09
SIX5Q8N196 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.59■□□□□ 0.09
SIX5Q8N196 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.59■□□□□ 0.09
SIX5Q8N196 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.59■□□□□ 0.09
SIX5Q8N196 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.59■□□□□ 0.09
SIX5Q8N196 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.59■□□□□ 0.09
SIX5Q8N196 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.59■□□□□ 0.09
SIX5Q8N196 POM121L8P-201ENST00000417732 1281 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.59■□□□□ 0.09
SIX5Q8N196 POM121L9P-203ENST00000441984 1285 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 FGFR3P1-201ENST00000449999 601 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.59■□□□□ 0.09
SIX5Q8N196 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.59■□□□□ 0.09
SIX5Q8N196 IGLV3-15-201ENST00000518356 244 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.59■□□□□ 0.09
SIX5Q8N196 AP003171.2-201ENST00000528208 925 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SIX5Q8N196 RN7SL163P-201ENST00000583100 276 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.59■□□□□ 0.09
SIX5Q8N196 BNIP3P13-201ENST00000599968 566 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 AC073352.2-201ENST00000609385 439 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 RN7SL736P-201ENST00000613111 269 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
SIX5Q8N196 AC011491.1-203ENST00000637688 543 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 AC004923.1-202ENST00000642106 209 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SIX5Q8N196 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SIX5Q8N196 KRT8P14-201ENST00000414254 1442 ntBASIC15.59■□□□□ 0.09
SIX5Q8N196 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIX5Q8N196 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms