Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AD000864.1-201ENST00000624076 2295 ntBASIC18.7■□□□□ 0.58
COL23A1Q86Y22 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 ACTBP7-201ENST00000418351 1124 ntBASIC18.69■□□□□ 0.58
COL23A1Q86Y22 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 AC018695.6-201ENST00000614011 534 ntBASIC18.69■□□□□ 0.58
COL23A1Q86Y22 AL451007.2-201ENST00000632004 563 ntBASIC18.69■□□□□ 0.58
COL23A1Q86Y22 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL23A1Q86Y22 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 LINC01815-202ENST00000641468 1409 ntBASIC18.68■□□□□ 0.58
COL23A1Q86Y22 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COL23A1Q86Y22 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 DPY19L2P5-201ENST00000456300 331 ntBASIC18.67■□□□□ 0.58
COL23A1Q86Y22 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COL23A1Q86Y22 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms