Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 AC136621.1-201ENST00000624017 2304 ntBASIC16.91■□□□□ 0.3
TRIM50Q86XT4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 AC020658.6-201ENST00000623564 1870 ntBASIC16.91■□□□□ 0.3
TRIM50Q86XT4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 KRT8P13-201ENST00000463294 1010 ntBASIC16.91■□□□□ 0.3
TRIM50Q86XT4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 AC138466.3-201ENST00000619983 221 ntBASIC16.91■□□□□ 0.3
TRIM50Q86XT4 AL139099.5-201ENST00000635274 300 ntBASIC16.91■□□□□ 0.3
TRIM50Q86XT4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 AC103702.1-201ENST00000548801 2630 ntBASIC16.9■□□□□ 0.3
TRIM50Q86XT4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.9■□□□□ 0.3
TRIM50Q86XT4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 HIST2H2BB-201ENST00000449108 381 ntBASIC16.9■□□□□ 0.3
TRIM50Q86XT4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 AP001258.2-201ENST00000529891 490 ntBASIC16.9■□□□□ 0.3
TRIM50Q86XT4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM50Q86XT4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms