Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 AC055876.2-201ENST00000531834 546 ntBASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 AC018442.1-201ENST00000421439 2061 ntBASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 AC097376.2-205ENST00000610159 5334 ntBASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 AC009118.2-201ENST00000613275 655 ntBASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF549Q6P9A3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 TSPY16P-201ENST00000449843 468 ntBASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 AC120045.2-201ENST00000567334 178 ntBASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 CHCHD2P3-201ENST00000603038 451 ntBASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 AC093813.1-201ENST00000605066 256 ntBASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 AJ011932.1-201ENST00000621707 465 ntBASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF549Q6P9A3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms