Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3F3CQ6NXT2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H3F3CQ6NXT2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H3F3CQ6NXT2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.08□□□□□ -0.15
H3F3CQ6NXT2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H3F3CQ6NXT2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H3F3CQ6NXT2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
H3F3CQ6NXT2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H3F3CQ6NXT2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 ENPP7P14-201ENST00000621765 1040 ntBASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 AP003680.1-201ENST00000598970 3660 ntBASIC14.08□□□□□ -0.16
H3F3CQ6NXT2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 TPM3P8-201ENST00000330554 643 ntBASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 GHSR-202ENST00000427970 912 ntBASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 DUX4L47-201ENST00000566374 394 ntBASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 MIR6869-201ENST00000619434 62 ntBASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms