Protein–RNA interactions for Protein: Q5T2W1

PDZK1, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1Q5T2W1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 AL133267.1-201ENST00000398220 340 ntBASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 TOMM22P5-201ENST00000416399 439 ntBASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 AL390955.2-201ENST00000603032 514 ntBASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 AL121723.1-201ENST00000445194 1519 ntBASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDZK1Q5T2W1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 PMS2P2-201ENST00000425039 1128 ntBASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 AC114501.2-201ENST00000439631 535 ntBASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 KRT18P43-201ENST00000469825 1281 ntBASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 RFPL4AP1-201ENST00000530883 850 ntBASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 TIMM17BP1-201ENST00000545713 516 ntBASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 AC009407.1-201ENST00000568958 598 ntBASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms