Protein–RNA interactions for Protein: Q53TQ3

INO80D, INO80 complex subunit D, humanhuman

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80DQ53TQ3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 RNA5SP486-201ENST00000515961 83 ntBASIC15.41■□□□□ 0.06
INO80DQ53TQ3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 HILS1-202ENST00000545329 423 ntBASIC15.41■□□□□ 0.06
INO80DQ53TQ3 KRT90P-201ENST00000549264 1064 ntBASIC15.41■□□□□ 0.06
INO80DQ53TQ3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 AC017083.2-201ENST00000608069 979 ntBASIC15.41■□□□□ 0.06
INO80DQ53TQ3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 ENPP7P14-201ENST00000621765 1040 ntBASIC15.41■□□□□ 0.06
INO80DQ53TQ3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
INO80DQ53TQ3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 MIR1909-201ENST00000411312 80 ntBASIC15.4■□□□□ 0.06
INO80DQ53TQ3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 AC245100.3-201ENST00000441281 285 ntBASIC15.4■□□□□ 0.06
INO80DQ53TQ3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 KLF2P4-201ENST00000451959 1225 ntBASIC15.4■□□□□ 0.06
INO80DQ53TQ3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 AP005482.1-201ENST00000563722 1273 ntBASIC15.4■□□□□ 0.06
INO80DQ53TQ3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 AC244669.2-201ENST00000612320 853 ntBASIC15.4■□□□□ 0.06
INO80DQ53TQ3 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.4■□□□□ 0.06
INO80DQ53TQ3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
INO80DQ53TQ3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
INO80DQ53TQ3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.39■□□□□ 0.05
INO80DQ53TQ3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
INO80DQ53TQ3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
INO80DQ53TQ3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
INO80DQ53TQ3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms