Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 AC105206.1-202ENST00000314927 2368 ntBASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 COL6A4P2-202ENST00000504443 2753 ntBASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 KRT18P13-201ENST00000400056 1290 ntBASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 AC004832.2-201ENST00000426397 482 ntBASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 TPT1P11-201ENST00000458482 498 ntBASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 RARRES2P8-201ENST00000566335 367 ntBASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 AC099522.2-201ENST00000607001 744 ntBASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 AC099521.3-201ENST00000624251 2938 ntBASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 TCAF1P1-201ENST00000414990 2232 ntBASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
ANKRD55Q3KP44 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ANKRD55Q3KP44 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms