Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.82□□□□□ -0.04
YBX1P67809 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
YBX1P67809 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
YBX1P67809 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.82□□□□□ -0.04
YBX1P67809 NME2P1-201ENST00000426182 414 ntBASIC14.82□□□□□ -0.04
YBX1P67809 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.82□□□□□ -0.04
YBX1P67809 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
YBX1P67809 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
YBX1P67809 AP001582.1-201ENST00000525856 295 ntBASIC14.82□□□□□ -0.04
YBX1P67809 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.82□□□□□ -0.04
YBX1P67809 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.82□□□□□ -0.04
YBX1P67809 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.82□□□□□ -0.04
YBX1P67809 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.82□□□□□ -0.04
YBX1P67809 AC027307.3-201ENST00000594262 1100 ntBASIC14.82□□□□□ -0.04
YBX1P67809 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.82□□□□□ -0.04
YBX1P67809 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.82□□□□□ -0.04
YBX1P67809 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
YBX1P67809 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
YBX1P67809 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.82□□□□□ -0.04
YBX1P67809 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
YBX1P67809 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.82□□□□□ -0.04
YBX1P67809 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
YBX1P67809 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.82□□□□□ -0.04
YBX1P67809 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
YBX1P67809 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
YBX1P67809 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
YBX1P67809 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.81□□□□□ -0.04
YBX1P67809 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.81□□□□□ -0.04
YBX1P67809 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
YBX1P67809 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.81□□□□□ -0.04
YBX1P67809 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.81□□□□□ -0.04
YBX1P67809 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.81□□□□□ -0.04
YBX1P67809 AC005225.4-201ENST00000557330 545 ntBASIC14.81□□□□□ -0.04
YBX1P67809 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
YBX1P67809 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 AC012645.4-201ENST00000610691 1061 ntBASIC14.81□□□□□ -0.04
YBX1P67809 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.81□□□□□ -0.04
YBX1P67809 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
YBX1P67809 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
YBX1P67809 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.81□□□□□ -0.04
YBX1P67809 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.81□□□□□ -0.04
YBX1P67809 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
YBX1P67809 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.81□□□□□ -0.04
YBX1P67809 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YBX1P67809 AC027601.5-201ENST00000624065 2482 ntBASIC14.81□□□□□ -0.04
YBX1P67809 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
YBX1P67809 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
YBX1P67809 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
YBX1P67809 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms