Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN17P56750 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.61□□□□□ -0.23
CLDN17P56750 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN17P56750 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN17P56750 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN17P56750 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN17P56750 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN17P56750 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN17P56750 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.61□□□□□ -0.23
CLDN17P56750 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLDN17P56750 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN17P56750 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 AL033527.5-201ENST00000641382 801 ntBASIC13.61□□□□□ -0.23
CLDN17P56750 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 AL157414.3-201ENST00000624276 1954 ntBASIC13.61□□□□□ -0.23
CLDN17P56750 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLDN17P56750 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN17P56750 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN17P56750 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 AL360270.3-201ENST00000609118 1348 ntBASIC13.61□□□□□ -0.23
CLDN17P56750 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN17P56750 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN17P56750 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN17P56750 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 REXO1L5P-201ENST00000622260 2098 ntBASIC13.6□□□□□ -0.23
CLDN17P56750 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CLDN17P56750 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.6□□□□□ -0.23
CLDN17P56750 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CLDN17P56750 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN17P56750 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 ACE3P-201ENST00000423435 1973 ntBASIC13.6□□□□□ -0.23
CLDN17P56750 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLDN17P56750 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDN17P56750 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CLDN17P56750 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 AL645937.2-201ENST00000396808 931 ntBASIC13.6□□□□□ -0.23
CLDN17P56750 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDN17P56750 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 AL162726.2-201ENST00000438986 1017 ntBASIC13.6□□□□□ -0.23
CLDN17P56750 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDN17P56750 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLDN17P56750 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN17P56750 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CLDN17P56750 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN17P56750 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN17P56750 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN17P56750 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN17P56750 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CLDN17P56750 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN17P56750 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.59□□□□□ -0.23
CLDN17P56750 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN17P56750 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN17P56750 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN17P56750 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN17P56750 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.59□□□□□ -0.23
CLDN17P56750 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN17P56750 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CLDN17P56750 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CLDN17P56750 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN17P56750 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms