Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.53□□□□□ -0.08
NR1H2P55055 AC105206.1-202ENST00000314927 2368 ntBASIC14.53□□□□□ -0.08
NR1H2P55055 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.53□□□□□ -0.08
NR1H2P55055 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NR1H2P55055 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NR1H2P55055 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.53□□□□□ -0.08
NR1H2P55055 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.53□□□□□ -0.08
NR1H2P55055 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 RNU1-129P-201ENST00000384064 167 ntBASIC14.53□□□□□ -0.08
NR1H2P55055 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.53□□□□□ -0.08
NR1H2P55055 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.53□□□□□ -0.08
NR1H2P55055 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
NR1H2P55055 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
NR1H2P55055 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NR1H2P55055 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.53□□□□□ -0.08
NR1H2P55055 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 AL512356.2-201ENST00000546955 174 ntBASIC14.53□□□□□ -0.08
NR1H2P55055 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NR1H2P55055 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.53□□□□□ -0.08
NR1H2P55055 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 U1.21-201ENST00000580816 167 ntBASIC14.53□□□□□ -0.08
NR1H2P55055 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.53□□□□□ -0.08
NR1H2P55055 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.53□□□□□ -0.08
NR1H2P55055 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 MTHFR-210ENST00000641407 2387 ntBASIC14.53□□□□□ -0.08
NR1H2P55055 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.53□□□□□ -0.08
NR1H2P55055 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
NR1H2P55055 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.52□□□□□ -0.08
NR1H2P55055 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H2P55055 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H2P55055 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H2P55055 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H2P55055 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.52□□□□□ -0.08
NR1H2P55055 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H2P55055 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.52□□□□□ -0.08
NR1H2P55055 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
NR1H2P55055 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H2P55055 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
NR1H2P55055 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.52□□□□□ -0.08
NR1H2P55055 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H2P55055 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H2P55055 AP001282.1-201ENST00000531301 1499 ntBASIC14.52□□□□□ -0.08
NR1H2P55055 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.52□□□□□ -0.08
NR1H2P55055 WASH3P-207ENST00000560956 1394 ntBASIC14.52□□□□□ -0.08
NR1H2P55055 FO538757.1-201ENST00000623083 1397 ntBASIC14.52□□□□□ -0.08
NR1H2P55055 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H2P55055 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H2P55055 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H2P55055 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.52□□□□□ -0.09
NR1H2P55055 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.52□□□□□ -0.09
NR1H2P55055 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.52□□□□□ -0.09
NR1H2P55055 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.52□□□□□ -0.09
NR1H2P55055 RNA5SP421-201ENST00000516864 134 ntBASIC14.52□□□□□ -0.09
NR1H2P55055 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 AC093520.2-201ENST00000561830 333 ntBASIC14.52□□□□□ -0.09
NR1H2P55055 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.52□□□□□ -0.09
NR1H2P55055 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.52□□□□□ -0.09
NR1H2P55055 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 AP001059.3-201ENST00000619053 235 ntBASIC14.52□□□□□ -0.09
NR1H2P55055 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.52□□□□□ -0.09
NR1H2P55055 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.52□□□□□ -0.09
NR1H2P55055 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.52□□□□□ -0.09
NR1H2P55055 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.52□□□□□ -0.09
NR1H2P55055 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NR1H2P55055 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
NR1H2P55055 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.52□□□□□ -0.09
NR1H2P55055 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.52□□□□□ -0.09
NR1H2P55055 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NR1H2P55055 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H2P55055 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
NR1H2P55055 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.51□□□□□ -0.09
NR1H2P55055 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H2P55055 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms