Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GABRA4P48169 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.35□□□□□ -0.11
GABRA4P48169 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GABRA4P48169 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
GABRA4P48169 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 AL023775.1-201ENST00000454907 1746 ntBASIC14.35□□□□□ -0.11
GABRA4P48169 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.35□□□□□ -0.11
GABRA4P48169 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.35□□□□□ -0.11
GABRA4P48169 AC023090.2-201ENST00000625182 2110 ntBASIC14.35□□□□□ -0.11
GABRA4P48169 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.34□□□□□ -0.11
GABRA4P48169 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 INE2-201ENST00000630399 1874 ntBASIC14.34□□□□□ -0.11
GABRA4P48169 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.34□□□□□ -0.11
GABRA4P48169 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.34□□□□□ -0.11
GABRA4P48169 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 RN7SKP175-201ENST00000408472 289 ntBASIC14.34□□□□□ -0.11
GABRA4P48169 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.34□□□□□ -0.11
GABRA4P48169 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GABRA4P48169 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 Z93015.1-201ENST00000451718 390 ntBASIC14.34□□□□□ -0.11
GABRA4P48169 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.34□□□□□ -0.11
GABRA4P48169 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.34□□□□□ -0.11
GABRA4P48169 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.34□□□□□ -0.11
GABRA4P48169 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.34□□□□□ -0.11
GABRA4P48169 PPY2P-201ENST00000582808 702 ntBASIC14.34□□□□□ -0.11
GABRA4P48169 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.34□□□□□ -0.11
GABRA4P48169 ZACNP1-201ENST00000612259 710 ntBASIC14.34□□□□□ -0.11
GABRA4P48169 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GABRA4P48169 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
GABRA4P48169 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 AC015818.8-201ENST00000587907 1519 ntBASIC14.34□□□□□ -0.11
GABRA4P48169 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 AL138725.1-201ENST00000407347 1314 ntBASIC14.34□□□□□ -0.11
GABRA4P48169 FKBP4P6-201ENST00000457486 1332 ntBASIC14.34□□□□□ -0.11
GABRA4P48169 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GABRA4P48169 HYMAI-201ENST00000635591 3347 ntBASIC14.34□□□□□ -0.11
GABRA4P48169 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GABRA4P48169 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GABRA4P48169 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.34□□□□□ -0.11
GABRA4P48169 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABRA4P48169 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GABRA4P48169 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.33□□□□□ -0.11
GABRA4P48169 AC068418.2-201ENST00000577309 3703 ntBASIC14.33□□□□□ -0.11
GABRA4P48169 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GABRA4P48169 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
GABRA4P48169 AC006486.2-201ENST00000624246 2199 ntBASIC14.33□□□□□ -0.11
GABRA4P48169 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.33□□□□□ -0.12
GABRA4P48169 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.33□□□□□ -0.12
GABRA4P48169 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.33□□□□□ -0.12
GABRA4P48169 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.33□□□□□ -0.12
GABRA4P48169 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.33□□□□□ -0.12
GABRA4P48169 AL591846.1-201ENST00000451736 433 ntBASIC14.33□□□□□ -0.12
GABRA4P48169 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.33□□□□□ -0.12
GABRA4P48169 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.33□□□□□ -0.12
GABRA4P48169 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.33□□□□□ -0.12
GABRA4P48169 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.33□□□□□ -0.12
GABRA4P48169 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.33□□□□□ -0.12
GABRA4P48169 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
GABRA4P48169 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.33□□□□□ -0.12
GABRA4P48169 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms