Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR4A1P22736 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.26□□□□□ -0.13
NR4A1P22736 AL627223.1-201ENST00000416693 442 ntBASIC14.26□□□□□ -0.13
NR4A1P22736 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.26□□□□□ -0.13
NR4A1P22736 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.26□□□□□ -0.13
NR4A1P22736 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.26□□□□□ -0.13
NR4A1P22736 AC027307.2-201ENST00000591252 911 ntBASIC14.26□□□□□ -0.13
NR4A1P22736 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.26□□□□□ -0.13
NR4A1P22736 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
NR4A1P22736 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NR4A1P22736 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR4A1P22736 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.26□□□□□ -0.13
NR4A1P22736 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR4A1P22736 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NR4A1P22736 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.26□□□□□ -0.13
NR4A1P22736 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR4A1P22736 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR4A1P22736 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR4A1P22736 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NR4A1P22736 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR4A1P22736 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.26□□□□□ -0.13
NR4A1P22736 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR4A1P22736 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.26□□□□□ -0.13
NR4A1P22736 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR4A1P22736 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NR4A1P22736 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.26□□□□□ -0.13
NR4A1P22736 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NR4A1P22736 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR4A1P22736 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NR4A1P22736 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.25□□□□□ -0.13
NR4A1P22736 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.25□□□□□ -0.13
NR4A1P22736 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 AC023141.5-201ENST00000458585 616 ntBASIC14.25□□□□□ -0.13
NR4A1P22736 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.25□□□□□ -0.13
NR4A1P22736 AC069335.1-201ENST00000489972 472 ntBASIC14.25□□□□□ -0.13
NR4A1P22736 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.25□□□□□ -0.13
NR4A1P22736 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.25□□□□□ -0.13
NR4A1P22736 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.25□□□□□ -0.13
NR4A1P22736 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
NR4A1P22736 AC027612.4-201ENST00000605371 583 ntBASIC14.25□□□□□ -0.13
NR4A1P22736 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.25□□□□□ -0.13
NR4A1P22736 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.25□□□□□ -0.13
NR4A1P22736 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.25□□□□□ -0.13
NR4A1P22736 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NR4A1P22736 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
NR4A1P22736 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NR4A1P22736 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.25□□□□□ -0.13
NR4A1P22736 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR4A1P22736 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.25□□□□□ -0.13
NR4A1P22736 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 AP001267.2-201ENST00000532619 2086 ntBASIC14.24□□□□□ -0.13
NR4A1P22736 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.24□□□□□ -0.13
NR4A1P22736 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NR4A1P22736 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NR4A1P22736 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.24□□□□□ -0.13
NR4A1P22736 KRT18P28-201ENST00000453838 1332 ntBASIC14.24□□□□□ -0.13
NR4A1P22736 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NR4A1P22736 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms