Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.46■□□□□ 0.39
SCG2P13521 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCG2P13521 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SCG2P13521 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.46■□□□□ 0.39
SCG2P13521 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.46■□□□□ 0.39
SCG2P13521 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.46■□□□□ 0.39
SCG2P13521 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCG2P13521 MIR1909-201ENST00000411312 80 ntBASIC17.46■□□□□ 0.39
SCG2P13521 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SCG2P13521 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.46■□□□□ 0.39
SCG2P13521 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.46■□□□□ 0.39
SCG2P13521 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.46■□□□□ 0.39
SCG2P13521 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.46■□□□□ 0.39
SCG2P13521 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.46■□□□□ 0.39
SCG2P13521 AC025279.2-201ENST00000569730 653 ntBASIC17.46■□□□□ 0.39
SCG2P13521 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.46■□□□□ 0.39
SCG2P13521 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.46■□□□□ 0.39
SCG2P13521 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
SCG2P13521 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 AL596257.1-201ENST00000641463 2694 ntBASIC17.46■□□□□ 0.39
SCG2P13521 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG2P13521 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCG2P13521 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.46■□□□□ 0.38
SCG2P13521 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SCG2P13521 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SCG2P13521 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SCG2P13521 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCG2P13521 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.45■□□□□ 0.38
SCG2P13521 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.45■□□□□ 0.38
SCG2P13521 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.45■□□□□ 0.38
SCG2P13521 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.45■□□□□ 0.38
SCG2P13521 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.45■□□□□ 0.38
SCG2P13521 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.45■□□□□ 0.38
SCG2P13521 AC004466.1-201ENST00000599515 1080 ntBASIC17.45■□□□□ 0.38
SCG2P13521 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCG2P13521 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SCG2P13521 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 AC013726.1-201ENST00000563747 2285 ntBASIC17.45■□□□□ 0.38
SCG2P13521 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SCG2P13521 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG2P13521 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.44■□□□□ 0.38
SCG2P13521 FGD5P1-202ENST00000614866 2498 ntBASIC17.44■□□□□ 0.38
SCG2P13521 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.44■□□□□ 0.38
SCG2P13521 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.44■□□□□ 0.38
SCG2P13521 MIR658-201ENST00000385210 100 ntBASIC17.44■□□□□ 0.38
SCG2P13521 FTH1P14-201ENST00000482930 551 ntBASIC17.44■□□□□ 0.38
SCG2P13521 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.44■□□□□ 0.38
SCG2P13521 RN7SL48P-201ENST00000579283 293 ntBASIC17.44■□□□□ 0.38
SCG2P13521 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SCG2P13521 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.44■□□□□ 0.38
SCG2P13521 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.44■□□□□ 0.38
SCG2P13521 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.44■□□□□ 0.38
SCG2P13521 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG2P13521 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.44■□□□□ 0.38
SCG2P13521 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SCG2P13521 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SCG2P13521 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms