Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC15.04■□□□□ -0
PDGFBP01127 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.04■□□□□ -0
PDGFBP01127 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.04■□□□□ -0
PDGFBP01127 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.04■□□□□ -0
PDGFBP01127 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.04■□□□□ -0
PDGFBP01127 AC012073.1-201ENST00000606114 1108 ntBASIC15.04■□□□□ -0
PDGFBP01127 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.04■□□□□ -0
PDGFBP01127 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.04■□□□□ -0
PDGFBP01127 AQP7P3-201ENST00000624547 1041 ntBASIC15.04■□□□□ -0
PDGFBP01127 AL451007.2-201ENST00000632004 563 ntBASIC15.04■□□□□ -0
PDGFBP01127 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.04■□□□□ -0
PDGFBP01127 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.04■□□□□ -0
PDGFBP01127 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.04■□□□□ -0
PDGFBP01127 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
PDGFBP01127 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PDGFBP01127 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.03■□□□□ -0
PDGFBP01127 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.03■□□□□ -0
PDGFBP01127 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.03■□□□□ -0
PDGFBP01127 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.03■□□□□ -0
PDGFBP01127 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.03■□□□□ -0
PDGFBP01127 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.03■□□□□ -0
PDGFBP01127 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.03■□□□□ -0
PDGFBP01127 GCSHP3-201ENST00000431120 391 ntBASIC15.03■□□□□ -0
PDGFBP01127 AL157407.1-201ENST00000435784 904 ntBASIC15.03■□□□□ -0
PDGFBP01127 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.03■□□□□ -0
PDGFBP01127 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.03■□□□□ -0
PDGFBP01127 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PDGFBP01127 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
PDGFBP01127 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.03■□□□□ -0
PDGFBP01127 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
PDGFBP01127 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.03■□□□□ -0
PDGFBP01127 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
PDGFBP01127 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 AC127383.1-201ENST00000444697 1800 ntBASIC15.03■□□□□ -0
PDGFBP01127 NFIC-211ENST00000641145 8399 ntBASIC15.03■□□□□ -0
PDGFBP01127 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.03■□□□□ -0
PDGFBP01127 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PDGFBP01127 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFBP01127 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
PDGFBP01127 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.02■□□□□ -0
PDGFBP01127 TNRC18P3-201ENST00000441896 2691 ntBASIC15.02■□□□□ -0
PDGFBP01127 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.02■□□□□ -0
PDGFBP01127 OR6D1P-203ENST00000641209 4860 ntBASIC15.02■□□□□ -0
PDGFBP01127 KRT8P31-201ENST00000504812 1408 ntBASIC15.02■□□□□ -0
PDGFBP01127 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PDGFBP01127 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.02■□□□□ -0
PDGFBP01127 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.02■□□□□ -0
PDGFBP01127 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.02■□□□□ -0
PDGFBP01127 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDGFBP01127 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.02■□□□□ -0
PDGFBP01127 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.02■□□□□ -0
PDGFBP01127 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC15.02■□□□□ -0
PDGFBP01127 PGAM1P12-201ENST00000505622 748 ntBASIC15.02■□□□□ -0
PDGFBP01127 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.02■□□□□ -0
PDGFBP01127 FAM86B3P-203ENST00000523992 854 ntBASIC15.02■□□□□ -0
PDGFBP01127 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms