Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CPNE6O95741 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE6O95741 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.98□□□□□ -0.01
CPNE6O95741 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.98□□□□□ -0.01
CPNE6O95741 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CPNE6O95741 AC106760.1-201ENST00000508690 800 ntBASIC14.98□□□□□ -0.01
CPNE6O95741 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE6O95741 AP001582.1-201ENST00000525856 295 ntBASIC14.98□□□□□ -0.01
CPNE6O95741 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CPNE6O95741 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.98□□□□□ -0.01
CPNE6O95741 MIR4525-201ENST00000580000 75 ntBASIC14.98□□□□□ -0.01
CPNE6O95741 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.98□□□□□ -0.01
CPNE6O95741 RN7SL219P-201ENST00000582872 296 ntBASIC14.98□□□□□ -0.01
CPNE6O95741 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.98□□□□□ -0.01
CPNE6O95741 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.98□□□□□ -0.01
CPNE6O95741 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CPNE6O95741 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CPNE6O95741 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CPNE6O95741 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE6O95741 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CPNE6O95741 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE6O95741 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CPNE6O95741 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CPNE6O95741 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CPNE6O95741 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE6O95741 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE6O95741 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE6O95741 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CPNE6O95741 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CPNE6O95741 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.97□□□□□ -0.01
CPNE6O95741 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 BRWD1P1-201ENST00000401091 371 ntBASIC14.97□□□□□ -0.01
CPNE6O95741 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 YBX1P6-201ENST00000442962 1002 ntBASIC14.97□□□□□ -0.01
CPNE6O95741 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.97□□□□□ -0.01
CPNE6O95741 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.97□□□□□ -0.01
CPNE6O95741 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.97□□□□□ -0.01
CPNE6O95741 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 MIR4313-201ENST00000580760 101 ntBASIC14.97□□□□□ -0.01
CPNE6O95741 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 RHOXF1P1-202ENST00000635473 501 ntBASIC14.97□□□□□ -0.01
CPNE6O95741 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CPNE6O95741 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CPNE6O95741 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.97□□□□□ -0.01
CPNE6O95741 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPNE6O95741 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.97□□□□□ -0.01
CPNE6O95741 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CPNE6O95741 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPNE6O95741 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPNE6O95741 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CPNE6O95741 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CPNE6O95741 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.96□□□□□ -0.01
CPNE6O95741 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPNE6O95741 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.96□□□□□ -0.01
CPNE6O95741 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CPNE6O95741 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPNE6O95741 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPNE6O95741 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPNE6O95741 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CPNE6O95741 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPNE6O95741 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPNE6O95741 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPNE6O95741 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.96□□□□□ -0.01
CPNE6O95741 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.96□□□□□ -0.01
CPNE6O95741 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.96□□□□□ -0.01
CPNE6O95741 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.96□□□□□ -0.01
CPNE6O95741 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms