Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 TPM3P8-201ENST00000330554 643 ntBASIC15.37■□□□□ 0.05
PRAMEF11O60813 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 ACA64.2-201ENST00000459014 129 ntBASIC15.37■□□□□ 0.05
PRAMEF11O60813 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 AP000812.2-201ENST00000538934 718 ntBASIC15.37■□□□□ 0.05
PRAMEF11O60813 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PRAMEF11O60813 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRAMEF11O60813 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 RPL7P3-201ENST00000441388 714 ntBASIC15.36■□□□□ 0.05
PRAMEF11O60813 AL590640.2-201ENST00000457038 527 ntBASIC15.36■□□□□ 0.05
PRAMEF11O60813 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 MESTP3-201ENST00000503460 968 ntBASIC15.36■□□□□ 0.05
PRAMEF11O60813 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 HILS1-202ENST00000545329 423 ntBASIC15.36■□□□□ 0.05
PRAMEF11O60813 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 ECM1P1-201ENST00000604092 1279 ntBASIC15.36■□□□□ 0.05
PRAMEF11O60813 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PRAMEF11O60813 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF11O60813 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms