Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.24□□□□□ -0.45
UPK2O00526 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.24□□□□□ -0.45
UPK2O00526 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.24□□□□□ -0.45
UPK2O00526 AC241585.1-201ENST00000433527 519 ntBASIC12.24□□□□□ -0.45
UPK2O00526 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 GAPDHP40-201ENST00000505218 1006 ntBASIC12.24□□□□□ -0.45
UPK2O00526 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.24□□□□□ -0.45
UPK2O00526 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
UPK2O00526 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.24□□□□□ -0.45
UPK2O00526 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
UPK2O00526 AL691403.2-201ENST00000618460 490 ntBASIC12.24□□□□□ -0.45
UPK2O00526 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.24□□□□□ -0.45
UPK2O00526 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
UPK2O00526 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.24□□□□□ -0.45
UPK2O00526 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
UPK2O00526 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
UPK2O00526 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
UPK2O00526 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.23□□□□□ -0.45
UPK2O00526 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
UPK2O00526 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
UPK2O00526 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
UPK2O00526 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
UPK2O00526 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 MIR943-201ENST00000401286 94 ntBASIC12.23□□□□□ -0.45
UPK2O00526 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.23□□□□□ -0.45
UPK2O00526 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.23□□□□□ -0.45
UPK2O00526 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.23□□□□□ -0.45
UPK2O00526 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 IGHV3-42-201ENST00000520410 361 ntBASIC12.23□□□□□ -0.45
UPK2O00526 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.23□□□□□ -0.45
UPK2O00526 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.23□□□□□ -0.45
UPK2O00526 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.23□□□□□ -0.45
UPK2O00526 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.23□□□□□ -0.45
UPK2O00526 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.23□□□□□ -0.45
UPK2O00526 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UPK2O00526 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 BX640514.1-201ENST00000583223 1918 ntBASIC12.23□□□□□ -0.45
UPK2O00526 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK2O00526 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.22□□□□□ -0.45
UPK2O00526 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.22□□□□□ -0.45
UPK2O00526 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms