Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AC007787.1-201ENST00000588095 1583 ntBASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 MST1P2-201ENST00000457982 2291 ntBASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 MIR346-201ENST00000362234 95 ntBASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AL355306.1-201ENST00000415580 579 ntBASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AL513190.1-201ENST00000621254 727 ntBASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV18A0A075B6X5 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRAV18A0A075B6X5 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
TRAV18A0A075B6X5 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRAV18A0A075B6X5 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 AC007967.2-201ENST00000432613 625 ntBASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms