Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCAF1Q9Y4C2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCAF1Q9Y4C2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.31■□□□□ 0.04
TCAF1Q9Y4C2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCAF1Q9Y4C2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCAF1Q9Y4C2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCAF1Q9Y4C2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCAF1Q9Y4C2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.31■□□□□ 0.04
TCAF1Q9Y4C2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 NUS1P3-201ENST00000423502 862 ntBASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 AC124283.3-201ENST00000570869 594 ntBASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 AL132655.2-201ENST00000596276 594 ntBASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 AL137783.1-201ENST00000623494 1896 ntBASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 BX539320.1-201ENST00000623759 877 ntBASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 MTHFR-210ENST00000641407 2387 ntBASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCAF1Q9Y4C2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 AC140479.7-201ENST00000636301 2332 ntBASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 C1QBPP1-201ENST00000400117 770 ntBASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 AC098850.1-201ENST00000419919 790 ntBASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 TSPY16P-201ENST00000449843 468 ntBASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 AC123567.1-201ENST00000548294 1261 ntBASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 PRSS30P-206ENST00000641773 873 ntBASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.29■□□□□ 0.04
TCAF1Q9Y4C2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCAF1Q9Y4C2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCAF1Q9Y4C2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.28■□□□□ 0.04
TCAF1Q9Y4C2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.28■□□□□ 0.04
TCAF1Q9Y4C2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TCAF1Q9Y4C2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TCAF1Q9Y4C2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.28■□□□□ 0.04
TCAF1Q9Y4C2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
TCAF1Q9Y4C2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.28■□□□□ 0.04
TCAF1Q9Y4C2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms