Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AC018529.2-202ENST00000611482 3087 ntBASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AL139385.1-201ENST00000611744 3272 ntBASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AC009947.1-201ENST00000444350 727 ntBASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AC004877.2-201ENST00000623941 599 ntBASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AC012508.2-201ENST00000567613 1472 ntBASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AP000845.1-201ENST00000581677 2131 ntBASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 AC092135.3-201ENST00000624151 1846 ntBASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 AC018442.1-201ENST00000421439 2061 ntBASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 UPK3BP1-201ENST00000428678 509 ntBASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 AC112191.1-201ENST00000523689 701 ntBASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 RARRES2P8-201ENST00000566335 367 ntBASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 AL121912.1-201ENST00000603683 238 ntBASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 AC008267.7-201ENST00000624570 1194 ntBASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 AL928921.2-201ENST00000641325 2442 ntBASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms