Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 AL080243.2-201ENST00000418783 582 ntBASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 AC241585.1-201ENST00000433527 519 ntBASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 AC097493.3-201ENST00000509725 367 ntBASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 MIR6069-201ENST00000620069 79 ntBASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 AL359258.3-201ENST00000622910 2331 ntBASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 BASP1P1-201ENST00000430708 665 ntBASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 AC092580.3-201ENST00000430932 139 ntBASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 TEX28P1-201ENST00000613479 1221 ntBASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 TEX28P2-201ENST00000617764 1221 ntBASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIN7CQ9NUP9 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms